2023

• Konstantinidis, Ioannis; Sætrom, Pål; Fernandes, Jorge Manuel de Oliveira. (2023) Genome-wide hydroxymethylation profiles in liver of female Nile tilapia with distinct growth performance. Scientific Data. volum 10.
  Vitenskapelig artikkel
• Rocque, Mariève; Leipart, Vilde; Singh, Ashish Kumar; Mur, Pilar; Olsen, Maren Fridtjofsen; Engebretsen, Lars Fredri; Martin-Ramos, Edgar; Aligué, Rosa; Sætrom, Pål; Valle, Laura; Drabløs, Finn Sverre; Otterlei, Marit; Sjursen, Wenche. (2023) Characterization of POLE c.1373A > T p.(Tyr458Phe), causing high cancer risk. Molecular Genetics and Genomics.
  Vitenskapelig artikkel

2022

• Grapotte, Mathys; Saraswat, Manu; Bessière, Chloé; Menichelli, Christophe; Ramilowski, Jordan A.; Severin, Jessica; Hayashizaki, Yoshihide; Itoh, Masayoshi; Tagami, Michihira; Murata, Mitsuyoshi; Kojima-Ishiyama, Miki; Noma, Shohei; Noguchi, Shuhei; Kasukawa, Takeya; Hasegawa, Akira; Suzuki, Harukazu; Nishiyori-Sueki, Hiromi; Frith, Martin C.; Abugessaisa, Imad; Aitken, Stuart; Aken, Bronwen L.; Alam, Intikhab; Alam, Tanvir; Alasiri, Rami; Alhendi, Ahmad M. N.; Alinejad-Rokny, Hamid; Alvarez, Mariano J.; Andersson, Robin; Arakawa, Takahiro; Araki, Marito; Arbel, Taly; Archer, John; Archibald, Alan L.; Arner, Erik; Arner, Peter; Asai, Kiyoshi; Ashoor, Haitham; Astrom, Gaby; Babina, Magda; Baillie, J. Kenneth; Bajic, Vladimir B.; Bajpai, Archana; Baker, Sarah; Baldarelli, Richard M.; Balic, Adam; Bansal, Mukesh; Batagov, Arsen O.; Batzoglou, Serafim; Beckhouse, Anthony G.; Beltrami, Antonio P.; Beltrami, Carlo A.; Bertin, Nicolas; Bhattacharya, Sharmodeep; Bickel, Peter J.; Blake, Judith A.; Blanchette, Mathieu; Bodega, Beatrice; Bonetti, Alessandro; Bono, Hidemasa; Bornholdt, Jette; Bttcher, Michael; Bougouffa, Salim; Boyd, Mette; Breda, Jeremie; Brombacher, Frank; Brown, James B.; Bult, Carol J.; Burroughs, A. Maxwell; Burt, Dave W.; Busch, Annika; Caglio, Giulia; Califano, Andrea; Cameron, Christopher J.; Cannistraci, Carlo V.; Carbone, Alessandra; Carlisle, Ailsa J.; Carninci, Piero; Carter, Kim W.; Cesselli, Daniela; Chang, Jen-Chien; Chen, Julie C.; Chen, Yun; Chierici, Marco; Christodoulou, John; Ciani, Yari; Clark, Emily L.; Coskun, Mehmet; Dalby, Maria; Dalla, Emiliano; Daub, Carsten O.; Davis, Carrie A.; de Hoon, Michiel J. L.; de Rie, Derek; Denisenko, Elena; Deplancke, Bart; Detmar, Michael; Deviatiiarov, Ruslan; Di Bernardo, Diego; Diehl, Alexander D.; Dieterich, Lothar C.; Dimont, Emmanuel; Djebali, Sarah; Dohi, Taeko; Dostie, Jose; Drabløs, Finn; Edge, Albert S. B.; Edinger, Matthias; Ehrlund, Anna; Ekwall, Karl; Elofsson, Arne; Endoh, Mitsuhiro; Enomoto, Hideki; Enomoto, Saaya; Faghihi, Mohammad; Fagiolini, Michela; Farach-Carson, Mary C.; Faulkner, Geoffrey J.; Favorov, Alexander; Fernandes, Ana Miguel; Ferrai, Carmelo; Forrest, Alistair R. R.; Forrester, Lesley M.; Forsberg, Mattias; Fort, Alexandre; Francescatto, Margherita; Freeman, Tom C.; Frith, Martin; Fukuda, Shinji; Funayama, Manabu; Furlanello, Cesare; Furuno, Masaaki; Furusawa, Chikara; Gao, Hui; Gazova, Iveta; Gebhard, Claudia; Geier, Florian; Geijtenbeek, Teunis B. H.; Ghosh, Samik; Ghosheh, Yanal; Gingeras, Thomas R.; Gojobori, Takashi; Goldberg, Tatyana; Goldowitz, Daniel; Gough, Julian; Greco, Dario; Gruber, Andreas J.; Guhl, Sven; Guigo, Roderic; Guler, Reto; Gusev, Oleg; Gustincich, Stefano; Ha, Thomas J.; Haberle, Vanja; Hale, Paul; Hallstrom, Bjrn M.; Hamada, Michiaki; Handoko, Lusy; Hara, Mitsuko; Harbers, Matthias; Harrow, Jennifer; Harshbarger, Jayson; Hase, Takeshi; Hasegawa, Akira; Hashimoto, Kosuke; Hatano, Taku; Hattori, Nobutaka; Hayashi, Ryuhei; Hayashizaki, Yoshihide; Herlyn, Meenhard; Heutink, Peter; Hide, Winston; Hitchens, Kelly J.; Sui, Shannon Ho; ’t Hoen, Peter A. C.; Hon, Chung Chau; Hori, Fumi; Horie, Masafumi; Horimoto, Katsuhisa; Horton, Paul; Hou, Rui; Huang, Edward; Huang, Yi; Hugues, Richard; Hume, David; Ienasescu, Hans; Iida, Kei; Ikawa, Tomokatsu; Ikemura, Toshimichi; Ikeo, Kazuho; Inoue, Norihiko; Ishizu, Yuri; Ito, Yosuke; Itoh, Masayoshi; Ivshina, Anna V.; Jankovic, Boris R.; Jenjaroenpun, Piroon; Johnson, Rory; Jorgensen, Mette; Jorjani, Hadi; Joshi, Anagha; Jurman, Giuseppe; Kaczkowski, Bogumil; Kai, Chieko; Kaida, Kaoru; Kajiyama, Kazuhiro; Kaliyaperumal, Rajaram; Kaminuma, Eli; Kanaya, Takashi; Kaneda, Hiroshi; Kapranov, Philip; Kasianov, Artem S.; Kasukawa, Takeya; Katayama, Toshiaki; Kato, Sachi; Kawaguchi, Shuji; Kawai, Jun; Kawaji, Hideya; Kawamoto, Hiroshi; Kawamura, Yuki I.; Kawasaki, Satoshi; Kawashima, Tsugumi; Kempfle, Judith S.; Kenna, Tony J.; Kere, Juha; Khachigian, Levon; Kiryu, Hisanori; Kishima, Mami; Kitajima, Hiroyuki; Kitamura, Toshio; Kitano, Hiroaki; Klaric, Enio; Klepper, Kjetil; Klinken, S. Peter; Kloppmann, Edda; Knox, Alan J.; Kodama, Yuichi; Kogo, Yasushi; Kojima, Miki; Kojima, Soichi; Komatsu, Norio; Komiyama, Hiromitsu; Kono, Tsukasa; Koseki, Haruhiko; Koyasu, Shigeo; Kratz, Anton; Kukalev, Alexander; Kulakovskiy, Ivan; Kundaje, Anshul; Kunikata, Hiroshi; Kuo, Richard; Kuo, Tony; Kuraku, Shigehiro; Kuznetsov, Vladimir A.; Kwon, Tae Jun; Larouche, Matt; Lassmann, Timo; Law, Andy; Le-Cao, Kim-Anh; Lecellier, Charles-Henri; Lee, Weonju; Lenhard, Boris; Lennartsson, Andreas; Li, Kang; Li, Ruohan; Lilje, Berit; Lipovich, Leonard; Lizio, Marina; Lopez, Gonzalo; Magi, Shigeyuki; Mak, Gloria K.; Makeev, Vsevolod; Manabe, Riichiro; Mandai, Michiko; Mar, Jessica; Maruyama, Kazuichi; Maruyama, Taeko; Mason, Elizabeth; Matsuda, Hideo; Medvedeva, Yulia A.; Meehan, Terrence F.; Mejhert, Niklas; Meynert, Alison; Mikami, Norihisa; Minoda, Akiko; Miura, Hisashi; Miyagi, Yohei; Miyawaki, Atsushi; Mizuno, Yosuke; Morikawa, Hiromasa; Morimoto, Mitsuru; Morioka, Masaki; Morishita, Soji; Moro, Kazuyo; Motakis, Efthymios; Motohashi, Hozumi; Mukarram, Abdul Kadir; Mummery, Christine L.; Mungall, Christopher J.; Murakawa, Yasuhiro; Muramatsu, Masami; Murata, Mitsuyoshi; Nagasaka, Kazunori; Nagase, Takahide; Nakachi, Yutaka; Nakahara, Fumio; Nakai, Kenta; Nakamura, Kumi; Nakamura, Yasukazu; Nakamura, Yukio; Nakazawa, Toru; Nason, Guy P.; Nepal, Chirag; Nguyen, Quan Hoang; Nielsen, Lars K.; Nishida, Kohji; Nishiguchi, Koji M.; Nishiyori, Hiromi; Nitta, Kazuhiro; Noguchi, Shuhei; Noma, Shohei; Notredame, Cedric; Ogishima, Soichi; Ohkura, Naganari; Ohno, Hiroshi; Ohshima, Mitsuhiro; Ohtsu, Takashi; Okada, Yukinori; Okada-Hatakeyama, Mariko; Okazaki, Yasushi; Oksvold, Per; Orlando, Valerio; Ow, Ghim Sion; Ozturk, Mumin; Pachkov, Mikhail; Paparountas, Triantafyllos; Parihar, Suraj P.; Park, Sung-Joon; Pascarella, Giovanni; Passier, Robert; Persson, Helena; Philippens, Ingrid H.; Piazza, Silvano; Plessy, Charles; Pombo, Ana; Ponten, Fredrik; Poulain, Stéphane; Poulsen, Thomas M.; Pradhan, Swati; Prezioso, Carolina; Pridans, Clare; Qin, Xiang-Yang; Quackenbush, John; Rackham, Owen; Ramilowski, Jordan; Ravasi, Timothy; Rehli, Michael; Rennie, Sarah; Rito, Tiago; Rizzu, Patrizia; Robert, Christelle; Roos, Marco; Rost, Burkhard; Roudnicky, Filip; Roy, Riti; Rye, Morten Beck; Sachenkova, Oxana; Sætrom, Pål; Sai, Hyonmi; Saiki, Shinji; Saito, Mitsue; Saito, Akira; Sakaguchi, Shimon; Sakai, Mizuho; Sakaue, Saori; Sakaue-Sawano, Asako; Sandelin, Albin; Sano, Hiromi; Sasamoto, Yuzuru; Sato, Hiroki; Saxena, Alka; Saya, Hideyuki; Schafferhans, Andrea; Schmeier, Sebastian; Schmidl, Christian; Schmocker, Daniel; Schneider, Claudio; Schueler, Marcus; Schultes, Erik A.; Schulze-Tanzil, Gundula; Semple, Colin A.; Seno, Shigeto; Seo, Wooseok; Sese, Jun; Severin, Jessica; Sheng, Guojun; Shi, Jiantao; Shimoni, Yishai; Shin, Jay W.; SimonSanchez, Javier; Sivertsson, Asa; Sjostedt, Evelina; Soderhall, Cilla; Laurent, Georges St; Stoiber, Marcus H.; Sugiyama, Daisuke; Summers, Kim M.; Suzuki, Ana Maria; Suzuki, Harukazu; Suzuki, Kenji; Suzuki, Mikiko; Suzuki, Naoko; Suzuki, Takahiro; Swanson, Douglas J.; Swoboda, Rolf K.; Tagami, Michihira; Taguchi, Ayumi; Takahashi, Hazuki; Takahashi, Masayo; Takamochi, Kazuya; Takeda, Satoru; Takenaka, Yoichi; Tam, Kin Tung; Tanaka, Hiroshi; Tanaka, Rica; Tanaka, Yuji; Tang, Dave; Taniuchi, Ichiro; Tanzer, Andrea; Tarui, Hiroshi; Taylor, Martin S.; Terada, Aika; Terao, Yasuhisa; Testa, Alison C.; Thomas, Mark; Thongjuea, Supat; Tomii, Kentaro; Triglia, Elena Torlai; Toyoda, Hiroo; Tsang, H. Gwen; Tsujikawa, Motokazu; Uhlén, Mathias; Valen, Eivind Dale; van de Wetering, Marc; van Nimwegen, Erik; Velmeshev, Dmitry; Verardo, Roberto; Vitezic, Morana; Vitting-Seerup, Kristoffer; von Feilitzen, Kalle; Voolstra, Christian R.; Vorontsov, Ilya E.; Wahlestedt, Claes; Wasserman, Wyeth W.; Watanabe, Kazuhide; Watanabe, Shoko; Wells, Christine A.; Winteringham, Louise N.; Wolvetang, Ernst; Yabukami, Haruka; Yagi, Ken; Yamada, Takuji; Yamaguchi, Yoko; Yamamoto, Masayuki; Yamamoto, Yasutomo; Yamamoto, Yumiko; Yamanaka, Yasunari; Yano, Kojiro; Yasuzawa, Kayoko; Yatsuka, Yukiko; Yo, Masahiro; Yokokura, Shunji; Yoneda, Misako; Yoshida, Emiko; Yoshida, Yuki; Yoshihara, Masahito; Young, Rachel; Young, Robert S.; Yu, Nancy Y.; Yumoto, Noriko; Zabierowski, Susan E.; Zhang, Peter G.; Zucchelli, Silvia; Zwahlen, Martin; Chatelain, Clément; Carninci, Piero; de Hoon, Michiel J. L.; Wasserman, Wyeth W.; Bréhélin, Laurent; Lecellier, Charles-Henri. (2022) Author Correction: Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network (Nature Communications, (2021), 12, 1, (3297), 10.1038/s41467-021-23143-7). Nature Communications. volum 13 (1).
  Errata
• Nøst, Therese Haugdahl; Skogholt, Anne Heidi; Urbarova, Ilona Halva; Mjelle, Robin; Paulsen, Erna-Elise; Dønnem, Tom; Andersen, Sigve; Markaki, Maria; Røe, Oluf Dimitri; Johansson, Mikael; Johansson, Mattias; Grønberg, Bjørn Henning; Sandanger, Torkjel M; Sætrom, Pål. (2022) Increased levels of microRNA-320 in blood serum and plasma is associated with imminent and advanced lung cancer. Molecular Oncology. volum 17 (2).
  Vitenskapelig artikkel
• Røe, Oluf Dimitri; Fotopoulos, I; Nguyen, Olav Toai Duc; Nøst, Therese Haugdahl; Markaki, M; Lagani, Vincenzo; Mjelle, Robin; Sandanger, Torkjel M; Sætrom, Pål; Tsamardinos, I. (2022) Common MicroRNAs in Pre-diagnostic Serum Associated with Lung Cancer in Two Cohorts up to Eight Years Before Diagnosis: A HUNT Study. Journal of Thoracic Oncology. volum 17 (9).
  Sammendrag/abstract

2021

• Baiju, Nikita; Sandanger, Torkjel M; Sætrom, Pål; Nøst, Therese Haugdahl. (2021) Gene expression in blood reflects smoking exposure among cancer-free women in the Norwegian Women and Cancer (NOWAC) postgenome cohort. Scientific Reports. volum 11 (1).
  Vitenskapelig artikkel
• Hegre, Siv Anita; Samdal, Helle; Klima, Antonin; Stovner, Endre Bakken; Nørsett, Kristin Gabestad; Liabakk, Nina-Beate; Olsen, Lene Christin; Chawla, Konika; Aas, Per Arne; Sætrom, Pål. (2021) Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation. Scientific Reports. volum 11:18952.
  Vitenskapelig artikkel
• Hildrestrand, Gunn Annette; Rolseth, Veslemøy; Kunath, Nicolas; Suganthan, Rajikala; Jensen, Vidar; Bugaj, Anna Maria; Fernandez Berrocal, Marion Silvana; SIkko, Sunniva Bøe; Vetlesen, Susanne; Kusnierczyk, Anna; Olsen, Ann-Karin Hardie; Gutzkow, Kristine Bjerve; Rowe, Alexander D.; Wang, Wei; Moldestad, Olve; Syrstad, Monica Dahl; Slupphaug, Geir; Eide, Lars; Klungland, Arne; Sætrom, Pål; Luna, Luisa; Ye, Jing; Scheffler, Katja; Bjørås, Magnar. (2021) NEIL1 and NEIL2 DNA glycosylases modulate anxiety and learning in a cooperative manner in mice. Communications Biology. volum 4.
  Vitenskapelig artikkel
• Konstantinidis, Ioannis; Anastasiadi, Dafni; Sætrom, Pål; Nedoluzhko, Artem; Mjelle, Robin; Podgorniak, Tomasz; Piferrer, Francesc; Fernandes, Jorge Manuel de Oliveira. (2021) Epigenetic mapping of the somatotropic axis in Nile tilapia reveals differential DNA hydroxymethylation marks associated with growth. Genomics. volum 113 (5).
  Vitenskapelig artikkel
• Rolinski, Milosz; Montaldo, Nicola Pietro; Aksu, Merdane Ezgi; Martin, Sarah Fordyce; Brambilla, Alessandro; Kunath, Nicolas; Johansen, Jostein; Erlandsen, Sten Even; Liabakk, Nina-Beate; Rian, Kristin; Bjørås, Magnar; Sætrom, Pål; van Loon, Barbara. (2021) Loss of Mediator complex subunit 13 (MED13) promotes resistance to alkylation through cyclin D1 upregulation. Nucleic Acids Research (NAR). volum 49 (3).
  Vitenskapelig artikkel
• Samdal, Helle; Olsen, Lene Christin; Grøn, Knut Sverre; Røyset, Elin Synnøve; Høiem, Therese Stork; Nervik, Ingunn; Sætrom, Pål; Wibe, Arne; Schønberg, Svanhild Margrethe Arentz; Pettersen, Caroline Hild. (2021) Establishment of a patient-derived xenograft model of colorectal cancer in CIEA NOG mice and exploring smartfish liquid diet as a source of omega-3 fatty acids. Biomedicines.
  Vitenskapelig artikkel
• Solvin, Åshild Øksnevad; Chawla, Konika; Olsen, Lene Christin; Hegre, Siv Anita; Danielsen, Kjersti; Jenssen, Marita; Furberg, Anne-Sofie; Saunes, Marit; Hveem, Kristian; Sætrom, Pål; Løset, Mari. (2021) MicroRNA profiling of psoriatic skin identifies 11 miRNAs associated with disease severity. Experimental Dermatology. volum 31 (4).
  Vitenskapelig artikkel
• Tingö, Lina; Ahlberg, Emelie; Johansson, Lovisa; Pedersen, Sindre Andre; Chawla, Konika; Sætrom, Pål; Cione, Erika; Simpson, Melanie Rae. (2021) Non-coding RNAs in human breast milk: A systematic review. Frontiers in Immunology. volum 12:725323.
  Vitenskapelig oversiktsartikkel/review

2020

• Huang, Kai-Wen; Reebye, Vikash; Czysz, Katherine; Ciriello, Simona; Dorman, Stephanie; Reccia, Isabella; Lai, Hong-Shiee; Peng, Ling; Kostomitsopoulos, Nikos; Nicholls, Joanna; Habib, Robert; Tomalia, Donald A.; Sætrom, Pål; Wilkes, Edmund; Cutillas, Pedro; Rossi, John; Habib, Nagy. (2020) Liver Activation of Hepatocellular Nuclear Factor-4α by Small Activating RNA Rescues Dyslipidemia and Improves Metabolic Profile. Molecular Therapy - Nucleic Acids. volum 19.
  Vitenskapelig artikkel
• Konstantinidis, Ioannis; Sætrom, Pål; Mjelle, Robin; Nedoluzhko, Artem; Robledo, Diego; Fernandes, Jorge Manuel de Oliveira. (2020) Major gene expression changes and epigenetic remodelling in Nile tilapia muscle after just one generation of domestication. Epigenetics. volum 15 (10).
  Vitenskapelig artikkel
• Mjelle, Robin; Aass, Kristin Roseth; Sjursen, Wenche; Hofsli, Eva; Sætrom, Pål. (2020) sMETASeq: combined profiling of microbiota and host small RNAs. iScience.
  Vitenskapelig artikkel
• Sarker, Debashis; Plummer, Ruth; Meyer, Tim; Sodergren, Mikael H; Basu, Bristi; Chee, Cheng Ean; Huang, Kai-Wen; Palmer, Daniel H; Ma, Yuk Ting; Evans, T R Jeff; Spalding, Duncan R C; Pai, Madhava; Sharma, Rohini; Pinato, David J; Spicer, James; Hunter, Sarah; Kwatra, Vineet; Nicholls, Joanna P; Collin, David; Nutbrown, Robert; Glenny, Helen; Fairbairn, Sonia; Reebye, Vikash; Voutila, Jon; Dorman, Stephanie; Andrikakou, Pinelopi; Lloyd, Peter; Felstead, Steve; Vasara, Jenni; Habib, Robert; Wood, Chris; Sætrom, Pål; Huber, Hans E; Blakey, David C.; Rossi, JJ; Habib, Nagy. (2020) MTL-CEBPA, a Small Activating RNA Therapeutic Upregulating C/EBP-α, in Patients with Advanced Liver Cancer: A First-in-Human, Multicenter, Open-Label, Phase I Trial. Clinical Cancer Research. volum 26 (15).
  Vitenskapelig artikkel

2019

• Brian, Ben F; Jolicoeur, Adrienne S; Guerrero, Candace R.; Nunez, Myra G; Sychev, Zoi E; Hegre, Siv Anita; Sætrom, Pål; Habib, Nagy; Drake, Justin M; Schwertfeger, Kathryn L; Freedman, Tanya S.. (2019) Unique-region phosphorylation targets LynA for rapid degradation, tuning its expression and signaling in myeloid cells. eLIFE. volum 8.
  Vitenskapelig artikkel
• Kroustallaki, Pinelopi; Lirussi, Lisa; Carracedo Huroz, Sergio; You, Panpan; Esbensen, Qin Ying; Götz, Alexandra; Jobert, Laure; Alsøe, Lene; Sætrom, Pål; Gagos, Sarantis; Nilsen, Hilde. (2019) SMUG1 Promotes Telomere Maintenance through Telomerase RNA Processing. Cell reports.
  Vitenskapelig artikkel
• Larose, Tricia L; Sætrom, Pål; Martinussen, Marit; Skogseth, Haakon; Sandanger, Torkjel M; Scélo, Ghislaine; McHale, Cliona M.; Jacobsen, Geir Wenberg; Smith, Martyn T.. (2019) In utero exposure to endocrine disrupting chemicals, micro-RNA profiles, and fetal growth: a pilot study protocol. Journal of Public Health Research. volum 8 (2).
  Vitenskapelig artikkel
• Mjelle, Robin; Dima, Simona O; Bacalbasa, Nicolae; Chawla, Konika; Sorop, Andrei; Cucu, Dana; Herlea, Vlad; Sætrom, Pål; Popescu, Irinel. (2019) Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients. BMC Cancer. volum 19 (1).
  Vitenskapelig artikkel
• Mjelle, Robin; Sjursen, Wenche; Thommesen, Liv; Sætrom, Pål; Hofsli, Eva. (2019) Small RNA expression from viruses, bacteria and human miRNAs in colon cancer tissue and its association with microsatellite instability and tumor location. BMC Cancer. volum 19 (1).
  Vitenskapelig artikkel
• Montaldo, Nicola Pietro; Bordin, Diana Lilian; Brambilla, Alessandro; Rösinger, Marcel; Martin, Sarah Fordyce; Bjørås, Karine Øian; Bradamante, Stefano; Aas, Per Arne; Furrer, Antonia; Olsen, Lene Christin; Kunath, Nicolas; Otterlei, Marit; Sætrom, Pål; Bjørås, Magnar; Samson, Leona D.; van Loon, Barbara. (2019) Alkyladenine DNA glycosylase associates with transcription elongation to coordinate DNA repair with gene expression. Nature Communications. volum 10 (1).
  Vitenskapelig artikkel
• Solvin, Åshild Øksnevad; Chawla, Konika; Olsen, Lene Christin; Danielsen, Kjersti; Jenssen, Marita; Furberg, Anne-Sofie; Saunes, Marit; Hveem, Kristian; Sætrom, Pål; Løset, Mari. (2019) Combined mRNA and miRNA Analysis of Psoriatic Skin. Forum for Nordic Dermato-Venereology. volum 24 (2).
  Sammendrag/abstract
• Solvin, Åshild Øksnevad; Chawla, Konika; Olsen, Lene Christin; Danielsen, Kjersti; Jenssen, Marita; Furberg, Anne-Sofie; Saunes, Marit; Hveem, Kristian; Sætrom, Pål; Løset, Mari. (2019) Differentially Expressed miRNAs and mRNAs in Psoriatic Skin. Journal of Investigative Dermatology. volum 139 (9S).
  Sammendrag/abstract
• Stovner, Endre Bakken; Sætrom, Pål. (2019) PyRanges: efficient comparison of genomic intervals in Python. Bioinformatics. volum 36 (3).
  Vitenskapelig artikkel
• Stovner, Endre Bakken; Sætrom, Pål. (2019) epic2 efficiently finds diffuse domains in ChIP-seq data. Bioinformatics. volum 35 (21).
  Vitenskapelig artikkel
• Zhao, Xiaoyang; Reebye, Vikash; Hitchen, Paul; Fan, Jia; Jiang, Hongchi; Sætrom, Pål; Rossi, John; Habib, Nagy A; Huang, Kai-Wen. (2019) Mechanisms involved in the activation of C/EBP? by small activating RNA in hepatocellular carcinoma. Oncogene. volum 38 (18).
  Vitenskapelig artikkel

2018

• Reebye, Vikash; Huang, Kai-Wen; Lin, Vivian; Jarvis, Sheba; Cutilas, Pedro; Dorman, Stephanie; Ciriello, Simona; Andrikakou, Pinelopi; Voutila, Jon; Sætrom, Pål; Mintz, Paul J; Reccia, Isabella; Rossi, John J; Huber, Hans; Habib, Robert; Kostomitsopoulos, Nikos; Blakey, David C.; Habib, Nagy A. (2018) Gene activation of CEBPA using saRNA: Preclinical studies of the first in human saRNA drug candidate for liver cancer. Oncogene. volum 37 (24).
  Vitenskapelig artikkel
• Sarno, Antonio; Sætrom, Pål; Kavli, Bodil Merete; Pettersen, Henrik Sahlin. (2018) Genomic Uracil and Cancer. Genomic Uracil - Evolution, Biology, Immunology and Disease.
  Faglig kapittel

2017

• de rie, D; Abugesaissa, I; Alam, T; Arner, E; Ashoor, H; Åström, G; Babina, M; Bertin, N; Burroughs, AM; Carlisle, AJ; Daub, CO; Detmar, M; Daviatiiarov, R; Fort, A; Gebhard, C; Goldowitz, D; Guhl, S; Ha, TJ; Harschbager, J; Hasegawa, R; Hashimoto, K; Herlyn, M; Heutink, P; Hitchens, KJ; Hong, CC; Huang, E; Ishizu, Y; Kai, C; Kasukawa, T; Klinken, P; Lassmann, T; Lecellier, CH; Lee, W; Lizio, M; Makeev, V; Mathelier, Anthony; Medvededa, YA; Mejhert, N; Mungall, CJ; Noma, S; Ohshima, M; Okada-Hatakeyama, M; Persson, H; Rizzu, P; Roudnicky, F; Sætrom, Pål; Sato, H; Severin, J; Shin, JW; Swoboda, RK; Tarui, H; Toyoda, H; Vitting-Serup, K; Winterinham, L; Yamaguchi, Y; Yasuzawa, K; Yoneda, M; Yumoto, N; Zabierowsky, S; Zang, PG; Wells, CA; Summers, KM; Kawaii, H; Sandelin, A; Rehli, M; Hayashisaki, Y; Carninci, P; Forrest, ARR; de Hoon, MJL; De Hoon, Michiel J L. (2017) An integrated expression atlas of miRNAs and their promoters in human and mouse. Nature Biotechnology. volum 35 (9).
  Vitenskapelig artikkel
• Landfors, Miriam; Johansen, Jostein; Aronsen, Jan Magnus; Vågbø, Cathrine Broberg; Doré, Louis C.; He, Chuan; Sjaastad, Ivar; Sætrom, Pål; Fedorcsák, Péter; Dahl, John Arne; Aanes, Håvard; Fusser, Markus; Klungland, Arne. (2017) Genome-wide profiling of DNA 5-hydroxymethylcytosine during rat Sertoli cell maturation. Cell Discovery. volum 3.
  Vitenskapelig artikkel
• Mjelle, Robin; Sellæg, Kjersti; Sætrom, Pål; Thommesen, Liv; Sjursen, Wenche; Hofsli, Eva. (2017) Identification of metastasis-associated microRNAs in serum from rectal cancer patients. OncoTarget. volum 8 (52).
  Vitenskapelig artikkel
• Olsen, Lene Christin; O'Reilly, Kally; Liabakk, Nina-Beate; Witter, Menno; Sætrom, Pål. (2017) MicroRNAs contribute to postnatal development of laminar differences and neuronal subtypes in the rat medial entorhinal cortex. Brain Structure and Function. volum 222 (7).
  Vitenskapelig artikkel
• Olsen, Maria Belland; Hildrestrand, Gunn Annette; Scheffler, Katja; Vinge, Leif Erik; Alfsnes, Katrine; Palibrk, Vuk; Wang, Junbai; Neurauter, Christine Gran; Gomez, Luisa Fernanda Luna; Johansen, Jostein; Øgaard, Jonas; Ohm, Ingrid Kristine; Slupphaug, Geir; Kusnierczyk, Anna; Fiane, Arnt E; Brorson, Sverre Henning; Zhang, Lili; Gullestad, Lars; Louch, William Edward; Iversen, Per Ole; Østlie, Ingunn; Klungland, Arne; Christensen, Geir Arve; Sjaastad, Ivar; Sætrom, Pål; Yndestad, Arne; Aukrust, Pål; Bjørås, Magnar; Finsen, Alexandra. (2017) NEIL3-Dependent Regulation of Cardiac Fibroblast Proliferation Prevents Myocardial Rupture. Cell reports. volum 18.
  Vitenskapelig artikkel
• Skogholt, Anne Heidi; Ryeng, Einar; Erlandsen, Sten Even; Skorpen, Frank; Arentz Schønberg, Svanhild Margrethe; Sætrom, Pål. (2017) Gene expression differences between PAXgene and Tempus blood RNA tubes are highly reproducible between independent samples and biobanks. BMC Research Notes. volum 10 (136).
  Vitenskapelig artikkel
• Voutila, Jon; Reebye, Vikash; Roberts, Thomas C.; Protopapa, Pantelitsa; Andrikakou, Pinelopi; Blakey, David C.; Habib, Robert; Huber, Hans; Sætrom, Pål; Rossi, John J.; Habib, Nagy A.. (2017) Development and mechanism of small activating RNA targeting CEBPA, a novel therapeutic in clinical trials for liver cancer. Molecular Therapy. volum 25 (12).
  Vitenskapelig artikkel

2016

• Langkilde, Ane; Olsen, Lene Christin; Sætrom, Pål; Drabløs, Finn Sverre; Besenbacher, Søren; Raaby, Line; Johansen, Claus; Iversen, Lars. (2016) Pathway Analysis of Skin from Psoriasis Patients after Adalimumab Treatment Reveals New Early Events in the Anti-Inflammatory Mechanism of Anti-TNF-α. PLOS ONE. volum 11 (12).
  Vitenskapelig artikkel
• Robles, Ana I.; Olsen, Karina Standahl; Tsui, Dana W.T.; Georgoulias, Vassilis; Creaney, Jenette; Dobra, Katalin; Vyberg, Mogens; Minato, Nagahiro; Anders, Robert A.; Børresen-Dale, Anne-Lise; Zhou, Jianwei; Sætrom, Pål; Nielsen, Boye Schnack; Kirschner, Michaela B.; Krokan, Hans Einar; Papadimitrakopoulou, Vassiliki; Tsamardinos, Ioannis; Røe, Oluf Dimitri. (2016) Excerpts from the 1st international NTNU symposium on current and future clinical biomarkers of cancer: innovation and implementation, June 16th and 17th 2016, Trondheim, Norway. Journal of Translational Medicine. volum 14:295.
  Vitenskapelig artikkel
• Røe, Oluf Dimitri; Mjelle, Robin; Sætrom, Pål; Andreassen, Trygve; Bathen, Tone Frost; Hveem, Kristian. (2016) Serum microRNAs/enriched pathways in lung cancer 1-4 years before diagnosis: A pilot study from the HUNT Biobank, Norway. Journal of Clinical Oncology.
  Sammendrag/abstract
• Stracquadanio, Giovanni; Wang, Xuting; Wallace, Marsha D; Grawenda, Anna M.; Zhang, Ping; Hewitt, Juliet; Zeron-Medina, Jorge; Castro-Giner, Francesc; Tomlinson, Ian P; Goding, Colin R.; Cygan, Kamil J; Fairbrother, William G; Thomas, Laurent; Sætrom, Pål; Gemignani, Federica; Landi, Stefano; Schuster-Böckler, Benjamin; Bell, Douglas A; Bond, Gareth L.. (2016) The importance of p53 pathway genetics in inherited and somatic cancer genomes. Nature Reviews Cancer. volum 16 (4).
  Vitenskapelig artikkel
• Yoon, Sorah; Huang, Kai-Wen; Reebye, Vikash; Mintz, Paul; Tien, Yu-Wen; Lai, Hong-Shiee; Sætrom, Pål; Reccia, Isabella; Swiderski, Piotr; Armstrong, Brian; Jozwiak, Agnieszka; Spalding, Duncan; Jiao, Long; Habib, Nagy; Rossi, John J. (2016) Targeted Delivery of C/EBPα -saRNA by Pancreatic Ductal Adenocarcinoma-specific RNA Aptamers Inhibits Tumor Growth in Vivo. Molecular Therapy. volum 24 (6).
  Vitenskapelig artikkel

2015

• Achar, Avinash; Sætrom, Pål. (2015) RNA motif discovery: a computational overview. Biology Direct. volum 10 (1).
  Vitenskapelig oversiktsartikkel/review
• Hansen, Maren Fridtjofsen; Johansen, Jostein; Bjørnevoll, Inga; Sylvander, Anna Elisabeth; Steinsbekk, Kristin Solum; Sætrom, Pål; Sandvik, Arne Kristian; Drabløs, Finn; Sjursen, Wenche. (2015) A novel POLE mutation associated with cancers of colon, pancreas, ovaries and small intestine. Familial Cancer. volum 14 (3).
  Vitenskapelig artikkel
• Hansen, Maren Fridtjofsen; Johansen, Jostein; Bjørnevoll, Inga; Sylvander, Anna Elisabeth; Steinsbekk, Kristin Solum; Sætrom, Pål; Sandvik, Arne Kristian; Drabløs, Finn; Sjursen, Wenche. (2015) A novel POLE variant, identified by exome sequencing, causes colorectal- and extra-colonic cancers. Familial Cancer. volum 14 (1).
  Sammendrag/abstract
• Mjelle, Robin; Hegre, Siv Anita; Aas, Per Arne; Slupphaug, Geir; Drabløs, Finn; Sætrom, Pål; Krokan, Hans Einar. (2015) Cell cycle regulation of human DNA repair and chromatin remodeling genes. DNA Repair. volum 30.
  Vitenskapelig artikkel
• Pettersen, Henrik Sahlin; Galashevskaya, Anastasia; Doseth, Berit; Sousa, Mirta; Sarno, Antonio; Visnes, Torkild; Aas, Per Arne; Liabakk, Nina-Beate; Slupphaug, Geir; Sætrom, Pål; Kavli, Bodil Merete; Krokan, Hans Einar. (2015) AID expression in B-cell lymphomas causes accumulation of genomic uracil and a distinct AID mutational signature. DNA Repair. volum 25.
  Vitenskapelig artikkel
• Simpson, Melanie Rae; Brede, Gaute; Johansen, Jostein; Johnsen, Roar; Storrø, Ola; Sætrom, Pål; Øien, Torbjørn. (2015) Human breast milk miRNA, maternal probiotic supplementation and atopic dermatitis in offspring. PLOS ONE. volum 10:e0143496 (12).
  Vitenskapelig artikkel

2014

• Johnsen, Ingvild Bjellmo; Løvstakken, Lasse; Åsvold, Bjørn Olav; Høydal, Morten; Sætrom, Pål; Bonnevie, Tora. (2014) NTNUs stjerneforskere. Adresseavisen.
  publications.INTERVJUSKRIFTL
• Krokan, Hans Einar; Sætrom, Pål; Aas, Per Arne; Pettersen, Henrik P Sahlin; Kavli, Bodil Merete; Slupphaug, Geir. (2014) Error-free versus mutagenic processing of genomic uracil-Relevance to cancer. DNA Repair. volum 19.
  Vitenskapelig artikkel
• Lange, LA; Hu, Y; Zhang, H; Xue, C; Schmidt, EM; Tang, ZZ; Bizon, C; Lange, EM; Smith, JD; Turner, EH; Jun, G; Kang, HM; Peloso, G; Auer, P; Li, KP; Flannick, J; Zhang, J; Fuchsberger, C; Gaulton, K; Lindgren, C; Locke, A; Manning, A; Sim, X; Rivas, MA; Holmen, Oddgeir; Gottesman, O; Lu, Y; Ruderfer, D; Stahl, EA; Duan, Q; Li, Y; Durda, P; Jiao, S; Isaacs, A; Hofman, A; Bis, JC; Correa, A; Griswold, ME; Jakobsdottir, J; Smith, AV; Schreiner, PJ; Feitosa, MF; Zhang, Q; Huffman, JE; Crosby, J; Wassel, CL; Do, R; Franceschini, N; Martin, LW; Robinson, JG; Assimes, TL; Crosslin, DR; Rosenthal, EA; Tsai, M; Rieder, MJ; Farlow, DN; Folsom, AR; Lumley, T; Fox, ER; Carlson, CS; Peters, U; Jackson, RD; Van Duijn, CM; Uitterlinden, AG; Levy, D; Rotter, JI; Taylor, HA; Gudnason, V; Siscovick, DS; Fornage, M; Borecki, IB; Hayward, C; Rudan, I; Chen, YE; Bottinger, EP; Loos, RJF; Sætrom, Pål; Hveem, Kristian; Boehnke, M; Groop, L; McCarthy, M; Meitinger, T; Ballantyne, CM; Gabriel, SB; O'Donnell, CJ; Post, WS; North, KE; Reiner, AP; Boerwinkle, E; Psaty, BM; Altshuler, D; Kathiresan, S; Lin, DY; Jarvik, GP; Cupples, LA; Kooperberg, C; Wilson, JG; Nickerson, DA; Abecasis, GR; Rich, SS; Tracy, RP; Willer, CJ. (2014) Whole-exome sequencing identifies rare and low-frequency coding variants associated with LDL cholesterol. American Journal of Human Genetics. volum 94 (2).
  Vitenskapelig artikkel
• Mintz, PJ; Huang, KW; Reebye, V; Nteliopoulos, G; Lai, HS; Sætrom, Pål; Kasahara, N; Jensen, S; Pai, M; Gordon, MYA; Marley, SB; Behan, R; Spalding, DR; Haoudi, A; Emara, MM; Nicholls, J; Rossi, JJ; Habib, NA. (2014) Exploiting Human CD34(+) Stem Cell-conditioned Medium for Tissue Repair. Molecular Therapy. volum 22 (1).
  Vitenskapelig artikkel
• Razick, Sabry; Mocnik, Rok; Thomas, Laurent; Ryeng, Einar; Drabløs, Finn; Sætrom, Pål. (2014) The eGenVar data management system--cataloguing and sharing sensitive data and metadata for the life sciences. Database: The Journal of Biological Databases and Curation.
  Vitenskapelig artikkel
• Razick, Sabry; Sætrom, Pål. (2014) The eGenVar Data Management System. eGenVar project,NTNU. 2014.
  Programvare
• Reddy, MA; Chen, Z; Park, JT; Wang, M; Lanting, L; Zhang, Q; Bhatt, K; Leung, A; Wu, X; Putta, S; Sætrom, Pål; Devaraj, S; Natarajan, R. (2014) Regulation of inflammatory phenotype in macrophages by a diabetes-induced long noncoding RNA. Diabetes. volum 63 (12).
  Vitenskapelig artikkel
• Reebye, V; Sætrom, Pål; Mintz, PJ; Huang, KW; Swiderski, P; Peng, L; Liu, C; Liu, XX; Lindkaer-Jensen, S; Zacharoulis, D; Kostomitsopoulos, N; Kasahara, N; Nicholls, JP; Jiao, LR; Pai, M; Spalding, DR; Mizandari, M; Chikovani, T; Emara, MM; Haoudi, A; Tomalia, DA; Rossi, JJ; Habib, NA. (2014) A Novel RNA Oligonucleotide Improves Liver Function and Inhibits Liver Carcinogenesis In Vivo. Hepatology. volum 59 (1).
  Vitenskapelig artikkel
• Thomas, Laurent; Sætrom, Pål. (2014) Circular RNAs are depleted of polymorphisms at microRNA binding sites. Bioinformatics. volum 30 (16).
  Vitenskapelig artikkel

2013

• Chavali, Sreenivas; Bruhn, Sören; Tiemann, Katrin; Sætrom, Pål; Barrenäs, Fredrik; Saito, Takaya; Kanduri, Kartiek; Wang, Hui; Benson, Mikael. (2013) MicroRNAs act complementarily to regulate disease-related mRNA modules in human diseases. RNA: A publication of the RNA Society. volum 19 (11).
  Vitenskapelig artikkel
• Diaz, Javier Pena; Hegre, Siv Anita; Anderssen, Endre; Aas, Per Arne; Mjelle, Robin; Gilfillan, Gregor Duncan; Lyle, Robert; Drabløs, Finn; Krokan, Hans Einar; Sætrom, Pål. (2013) Transcription profiling during the cell cycle shows that a subset of Polycomb-targeted genes is upregulated during DNA replication. Nucleic Acids Research (NAR). volum 41 (5).
  Vitenskapelig artikkel
• Hegre, Siv Anita; Sætrom, Pål; Aas, Per Arne; Pettersen, Henrik P Sahlin; Otterlei, Marit; Krokan, Hans Einar. (2013) Multiple microRNAs may regulate DNA repair enzyme uracil‐DNA glycosylase. DNA Repair. volum 12 (1).
  Vitenskapelig artikkel
• Leung, A; Trac, C; Jin, W; Lanting, L; Akbany, A; Sætrom, Pål; Schones, DE; Natarajan, R. (2013) Novel Long Noncoding RNAs Are Regulated by Angiotensin II in Vascular Smooth Muscle Cells. Circulation Research. volum 113 (3).
  Vitenskapelig artikkel
• Lundbæk, Marie B; Sætrom, Pål. (2013) RNAi Screening and Assays. Encyclopedia of Molecular Cell Biology and Molecular Medicine.
  Vitenskapelig Kapittel/Artikkel/Konferanseartikkel
• Reebye, Vikash; Sætrom, Pål; Mintz, Paul J; Rossi, JJ; Kasahara, Noriyuki; Nteliopoulos, G; Nicholls, Joanna P; Haoudi, Abdelali; Gordon, Myrtle YA; Habib, Nagy A. (2013) A short-activating RNA oligonucleotide targeting the islet β-cell transcriptional factor MafA in CD34(+) cells. Molecular Therapy - Nucleic Acids. volum 2.
  Vitenskapelig artikkel
• Sætrom, Pål. (2013) Designing dual-targeting siRNA duplexes having two active strands that combine siRNA and microRNA-like targeting. Methods in molecular biology. volum 942.
  Vitenskapelig artikkel

2012

• Håndstad, Tony; Rye, Morten Beck; Mocnik, Rok; Drabløs, Finn; Sætrom, Pål. (2012) Cell-type specificity of ChIP-predicted transcription factor binding sites. BMC Genomics. volum 13.
  Vitenskapelig artikkel
• Mintz, Paul J; Sætrom, Pål; Reebye, Vikash; Lundbæk, Marie Benner; Lao, Kaiqin; Rossi, John J; Gaensler, Karin ML; Kasahara, Noriyuki; Nicholls, Joanna P; Jensen, Steen; Haoudi, Abdelali; Emara, Mohamed M; Gordon, Myrtle YA; Habib, Nagy A. (2012) MicroRNA-181a* Targets Nanog in a Subpopulation of CD34+ Cells Isolated From Peripheral Blood. Molecular Therapy - Nucleic Acids. volum 1 (e34).
  Vitenskapelig artikkel
• Saito, Takaya; Sætrom, Pål. (2012) Target gene expression levels and competition between transfected and endogenous microRNAs are strong confounding factors in microRNA high-throughput experiments. Silence. volum 3.
  Vitenskapelig artikkel
• Sjögren, A.-K.M.; Barrenäs, Fredrik; Muraro, Antonella; Gustafsson, M; Sætrom, Pål; Wang, H; Benson, M.. (2012) Monozygotic twins discordant for intermittent allergic rhinitis differ in mRNA and protein levels. Allergy. European Journal of Allergy and Clinical Immunology. volum 67 (6).
  Vitenskapelig artikkel
• Thomas, Laurent; Sætrom, Pål. (2012) Single Nucleotide Polymorphisms Can Create Alternative Polyadenylation Signals and Affect Gene Expression through Loss of MicroRNA-Regulation. PLoS Computational Biology. volum 8 (8).
  Vitenskapelig artikkel
• Voutila, J; Sætrom, Pål; Mintz, Paul J; Sun, Guihua; Alluin, Jessica; Rossi, JJ; Habib, Nagy A.; Kasahara, N.. (2012) Gene expression profile changes after short-activating RNA-mediated induction of endogenous pluripotency factors in human mesenchymal stem cells. Molecular Therapy - Nucleic Acids. volum 1 (8).
  Vitenskapelig artikkel

2011

• Håndstad, Tony; Rye, Morten Beck; Drabløs, Finn; Sætrom, Pål. (2011) A ChIP-Seq Benchmark Shows That Sequence Conservation Mainly Improves Detection of Strong Transcription Factor Binding Sites. PLOS ONE. volum 6 (4).
  Vitenskapelig artikkel
• Lundbæk, Marie Benner; Sætrom, Pål. (2011) Unconventional RNA interference – recent approaches to robust RNAi. European Pharmaceutical Review. volum 5.
  Faglig artikkel
• Rye, Morten Beck; Sætrom, Pål; Drabløs, Finn. (2011) A manually curated ChIP-seq benchmark demonstrates room for improvement in current peak-finder programs. Nucleic Acids Research (NAR). volum 39 (4).
  Vitenskapelig artikkel
• Rye, Morten Beck; Sætrom, Pål; Håndstad, Tony; Drabløs, Finn. (2011) Clustered ChIP-Seq-defined transcription factor binding sites and histone modifications map distinct classes of regulatory elements. BMC Biology. volum 9.
  Vitenskapelig artikkel
• Thomas, Laurent; Saito, Takaya; Sætrom, Pål. (2011) Inferring causative variants in microRNA target sites. Nucleic Acids Research (NAR). volum 39 (16).
  Vitenskapelig artikkel

2010

• Saito, Takaya; Sætrom, Pål. (2010) MicroRNAs – targeting and target prediction. New Biotechnology. volum 27 (3).
  Vitenskapelig oversiktsartikkel/review
• Ehsani, A; Sætrom, Pål; Zhang, J; Alluin, J; Li, HT; Snøve, Ola; Aagaard, L; Rossi, JJ. (2010) Rational Design of Micro-RNA-like Bifunctional siRNAs Targeting HIV and the HIV Coreceptor CCR5. Molecular Therapy. volum 18 (4).
  Vitenskapelig artikkel
• Matveeva, OV; Kang, YB; Spiridonov, AN; Sætrom, Pål; Nemtsov, VA; Ogurtsov, AY; Nechipurenko, YD; Shabalina, SA. (2010) Optimization of Duplex Stability and Terminal Asymmetry for shRNA Design. PLOS ONE. volum 5 (4).
  Vitenskapelig artikkel
• Saito, Takaya; Sætrom, Pål. (2010) A two-step site and mRNA-level model for predicting microRNA targets. BMC Bioinformatics. volum 11.
  Vitenskapelig artikkel
• Tiemann, Katrin; Höhn, Britta; Ehsani, Ali; Forman, Stephen J.; Rossi, John J.; Sætrom, Pål. (2010) Dual-targeting siRNAs. RNA: A publication of the RNA Society. volum 16 (6).
  Vitenskapelig artikkel

2009

• Snøve, Ola; Sætrom, Pål. (2009) Animal MicroRNA gene prediction. Regulation of Gene Expression by Small RNAs.
  Vitenskapelig Kapittel/Artikkel/Konferanseartikkel
• Sætrom, Pål; Biesinger, Jacob; Li, Sierra M.; Smith, David; Thomas, Laurent Francois; Majzoub, Karim; Rivas, Guillermo E.; Alluin, Jessica; Rossi, John J.; Krontiris, Theodore G.; Weitzel, Jeffrey; Daly, Mary B.; Benson, Al B.; Kirkwood, John M.; O'Dwyer, Peter J.; Sutphen, Rebecca; Stewart, James A.; Johnson, David; Larson, Garrett P.. (2009) A Risk Variant in an miR-125b Binding Site in BMPR1B Is Associated with Breast Cancer Pathogenesis. Cancer Research. volum 69 (18).
  Vitenskapelig artikkel
• Sætrom, Pål; Klein, Joern. (2009) miRNA and viral infections in vertebrates. European Pharmaceutical Review.
  Vitenskapelig oversiktsartikkel/review

2008

• Aagaard, Lars; Zhang, J; von Eije, K J; Li, H; S�trom, P�l; Saetrom, P; Amarzguioui, M; Rossi, John J.. (2008) Engineering and optimization of the miR-106b cluster for ectopic expression of multiplexed anti-HIV RNAs. Gene Therapy. volum 15 (23).
  Vitenskapelig artikkel
• Kim, Daniel H.; S�trom, P�l; Sn�ve, Ola; Rossi, John J.. (2008) MicroRNA-directed transcriptional gene silencing in mammalian cells. Proceedings of the National Academy of Sciences of the United States of America. volum 105 (42).
  Vitenskapelig artikkel
• Lee, N.S.; Kim, J.S.; Cho, W.J.; Lee, M.R.; Steiner, R.; Gompers, A.; Ling, D.; Zhang, J.; Sætrom, Pål; Behlke, Mark A.; Moon, S.H.; Salvaterra, P.M.; Jove, R.; Kim, K.S.. (2008) miR-302b maintains "stemness" of human embryonal carcinoma cells by post-transcriptional regulation of Cyclin D2 expression. Biochemical and Biophysical Research Communications - BBRC. volum 377 (2).
  Vitenskapelig artikkel
• Smith, DD; Sætrom, Pål; Snøve, Ola; Lundberg, C; Rivas, GE; Glackin, C; Larson, GP. (2008) Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation. BMC Bioinformatics. volum 9.
  Vitenskapelig artikkel
• Soifer, Harris S.; Sano, Masayuki; Sakurai, Kumi; Chomchan, Pritsana; S�trom, P�l; Sherman, Mark A.; Collingwood, Michael A.; Behlke, Mark A.; Rossi, John J.. (2008) A role for the Dicer helicase domain in the processing of thermodynamically unstable hairpin RNAs. Nucleic Acids Research (NAR). volum 36 (20).
  Vitenskapelig artikkel

2007

• Sætrom, Pål; Birkeland, Olaf René; Snøve, Ola. (2007) Boosting Improves Stability and Accuracy of Genetic Programming in Biological Sequence Classification. Genetic Programming Theory and Practice IV.
  Vitenskapelig Kapittel/Artikkel/Konferanseartikkel
• Helvik, Snorre Andreas; Snøve, Ola; Sætrom, Pål. (2007) Reliable prediction of Drosha processing sites improves microRNA gene prediction. Bioinformatics. volum 23 (2).
  Vitenskapelig artikkel
• Håndstad, Tony; Hestnes, Arne Johan Husebø; Sætrom, Pål. (2007) Motif kernel generated by genetic programming improves remote homology and fold detection. BMC Bioinformatics. volum 8.
  Vitenskapelig artikkel
• Matveeva, Olga; Nechipurenko, Yury; Rossi, Leo; Moore, Barry; Sætrom, Pål; Ogurtsov, Aleksey Y.; Atkins, John F.; Shabalina, Svetlana A.. (2007) Comparison of approaches for rational siRNA design leading to a new efficient and transparent method. Nucleic Acids Research (NAR). volum 35 (8).
  Vitenskapelig artikkel
• Soifer, Harris S.; Rossi, John J.; Sætrom, Pål. (2007) MicroRNAs in Disease and Potential Therapeutic Applications. Molecular Therapy. volum 15 (12).
  Vitenskapelig oversiktsartikkel/review
• Sætrom, Pål. (2007) Hardware accelerated genetic programming for pattern mining in strings. 2007. ISBN 82-471-7289-5. Doktoravhandlinger ved NTNU (197).
  Doktorgradsavhandling
• Sætrom, Pål; Heale, Bret S.; Snøve, Ola; Aagaard, Lars; Alluin, Jessica; Rossi, John J.. (2007) Distance constraints between microRNA target sites dictate efficacy and cooperativity. Nucleic Acids Research (NAR). volum 35 (7).
  Vitenskapelig artikkel
• Sætrom, Pål; Snøve, Ola. (2007) Machine learning predicts microRNA target sites. microRNAs: From Basic Science to Disease Biology.
  Vitenskapelig Kapittel/Artikkel/Konferanseartikkel
• Sætrom, Pål; Snøve, Ola. (2007) Robust machine learning algorithms predict microRNA genes and targets. Methods in Enzymology. volum 427C.
  Vitenskapelig artikkel
• Sætrom, Pål; Snøve, Ola; Rossi, John J.. (2007) Epigenetics and MicroRNAs. Pediatric Research. volum 61 (5).
  Vitenskapelig oversiktsartikkel/review
• Von Eije, KJ; Aagaard, Lars; Sætrom, Pål; Amarzguioui, M; Li, HT; Rossi, JJ. (2007) Prevention of HIV-1 viral escape upon RNAi treatment: Expression systems that generate multiple anti-HIV siRNAs. Human Gene Therapy. volum 18.
  Sammendrag/abstract

2006

• Birkeland, Olaf René; Snøve, Ola; Halaas, Arne; Nedland, Magnar; Sætrom, Pål. (2006) The petacomp Machine - A MIMD Cluster for parallel pattern-mining. Proceedings IEEE International Conference on Cluster Computing.
  Vitenskapelig artikkel
• Helvik, Snorre Andreas; Snøve, Ola; Sætrom, Pål. (2006) Reliable prediction of Drosha processing sites improves microRNA gene prediction. Bioinformatics. volum 23 (2).
  Vitenskapelig artikkel
• Snøve, Ola; Sætrom, Pål. (2006) Nobelpris for RNA-interferens. Tidsskrift for Den norske legeforening. volum 126 (24).
  Leder

2005

• Sætrom, Pål. (2005) Hardware accelerated genetic programming for pattern mining in strings. 2005. ISBN 82-471-7289-5. Doktoravhandlinger ved NTNU (2005:197).
  Doktorgradsavhandling