Konika Chawla

Senioringeniør

Institutt for klinisk og molekylær medisin Fakultet for medisin og helsevitenskap

Laboratoriesenteret, 231.05.056, Øya, Erling Skjalgssons g 1

Works at Biocore (Bioinformatics core facility) and assists with analysis of different types high throughput data analysis-

Small-RNA sequencing data,

RNAseq data,

Microarray data,

Bacterial whole genome sequencing data etc.

Vitenskapelig, faglig og kunstnerisk arbeid

Viser et utvalg av aktivitet. Se alle publikasjoner i databasen

Tidsskriftspublikasjoner

Chawla, Konika; Kuiper, Martin. (2016) Genes2GO: A web application for querying gene sets for specific GO terms. Bioinformation. vol. 12 (3).
Tripathi, Sushil; Vercruysse, Steven; Chawla, Konika; Christie, Karen R.; Blake, Judith A; Huntley, Rachael P.; Orchard, Sandra; Hermjakob, Henning; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. (2016) Gene regulation knowledge commons: community action takes care of DNA binding transcription factors. Database: The Journal of Biological Databases and Curation.
Tripathi, Sushil; Flobak, Åsmund; Chawla, Konika; Baudot, Anaïs; Bruland, Torunn; Thommesen, Liv; Kuiper, Martin Tremen R.; Lægreid, Astrid. (2015) The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms. BMC Systems Biology. vol. 9 (40).
Chawla, Konika; Tripathi, Sushil; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. (2013) TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors. Bioinformatics. vol. 29 (19).

Del av bok/rapport

Chawla, Konika; Barah, Pankaj; Kuiper, Martin; Bones, Atle M.. (2011) Systems Biology: a Promising Tool to Study Abiotic Stress Responses. Omics and Plant Abiotic Stress Tolerance.

Rapport/avhandling

Chawla, Konika; Kuiper, Martin. (2017) Discovering, analysing and taking care of knowledge. 2017. ISBN 978-82-326-2316-7.

Andre

Wohlwend, Martin Rainer; Chawla, Konika; Wisløff, Ulrik; Moreira, Jose Bianco Nascimento. (2017) Exercise regulates expression of long noncoding RNAs. 15th Annual CHFR Symposium on Heart Failure ; 2017-09-20 - 2017-09-22.
Wohlwend, Martin Rainer; Chawla, Konika; Wisløff, Ulrik; Moreira, Jose Bianco Nascimento. (2017) Exercise regulates expression of long noncoding RNAs. Cell Symposia: Exercise Metabolism ; 2017-05-21 - 2017-05-23.
Johansen, Jostein; Chawla, Konika; Olsen, Lene Christin; Sætrom, Pål. (2016) Bioinformatics Core Facility. Seminar for staff at the future Faculty of Medicine and Health Sciences . NTNU; Trondheim. 2016-11-10 - 2016-11-11.
De Mulder, Wim; Zavareh, Zahra; Chawla, Konika; Kuiper, Martin. (2014) Experimental Verification of the Quality of Clusterings Produced by Hard Clustering Algorithms After the Removal of Unstable Data Elements. BIOTECHNO 2014, DBKDA 2014 . International Academy, Research and Industry Association; Chamonix. 2014-04-20 - 2014-04-24.
Sanabria, Adriana Maria; Chawla, Konika; Drabløs, Finn; Steigedal, Magnus; Mæland, Johan A.; Afset, Jan Egil. (2014) An attempt to elucidate the genes encoding R3,Z1 and Z2 surface exposed proteins from two streptococcus agalactiae strains from Zimbabwe. 2014 XIX Lancefield International Symposium on Streptococci and Streptococcal Diseases . SADEBAC, aam(asociacion argentina de microbiologia); Buenos Aires. 2014-11-09 - 2014-11-12.
Tripathi, Sushil; Venkatesan, Aravind; Egaña, Mikel; Zavareh, Zahra; Chawla, Konika; Mironov, Vladimir; Thommesen, Liv; Bruland, Torunn; Kuiper, Martin; Lægreid, Astrid. (2011) Automated Assessment of High Throughput Hypotheses on Gene Regulatory Mechanisms Involved in the Gastrin Response. Bio-Ontologies 2011 . ISMB 2011; Vienna. 2011-07-15 - 2011-07-16.