Konika Chawla
Om
Works at Biocore (Bioinformatics core facility) where she assists with analysis of different types high throughput data such as: Small-RNA sequencing, RNAseq, Microarray data, Bacterial whole genome sequencing data etc.
Kompetanseord
Publikasjoner
2021
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Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Hegre, Siv Anita;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål.
(2021)
MicroRNA profiling of psoriatic skin identifies 11 miRNAs associated with disease severity.
Experimental Dermatology
Vitenskapelig artikkel
-
Tingö, Lina;
Ahlberg, Emelie;
Johansson, Lovisa;
Pedersen, Sindre Andre;
Chawla, Konika;
Sætrom, Pål;
Cione, Erika;
Simpson, Melanie Rae.
(2021)
Non-coding RNAs in human breast milk: A systematic review.
Frontiers in Immunology
Vitenskapelig oversiktsartikkel
-
Hegre, Siv Anita;
Samdal, Helle;
Klima, Antonin;
Stovner, Endre Bakken;
Nørsett, Kristin Gabestad;
Liabakk, Nina-Beate;
Olsen, Lene Christin;
Chawla, Konika;
Aas, Per Arne;
Sætrom, Pål.
(2021)
Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation.
Scientific Reports
Vitenskapelig artikkel
2019
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål;
Løset, Mari.
(2019)
Combined mRNA and miRNA Analysis of Psoriatic Skin.
Forum for Nordic Dermato-Venereology
Konferanseabstract
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Mjelle, Robin;
Dima, Simona O;
Bacalbasa, Nicolae;
Chawla, Konika;
Sorop, Andrei;
Cucu, Dana;
Herlea, Vlad;
Sætrom, Pål;
Popescu, Irinel.
(2019)
Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients.
BMC Cancer
Vitenskapelig artikkel
2018
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Toraskar, Jimita Prashant;
Magnussen, Synnøve;
Chawla, Konika;
Svineng, Gunbjørg;
Steigedal, Tonje S..
(2018)
Nephronectin mediates p38 MAPK‐induced cell viability via its integrin binding enhancer motif.
FEBS Open Bio
Vitenskapelig artikkel
2017
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Chawla, Konika;
Kuiper, Martin.
(2017)
Discovering, analysing and taking care of knowledge.
Norges teknisk-naturvitenskapelige universitet
Doktoravhandling
2016
-
Chawla, Konika;
Kuiper, Martin.
(2016)
Genes2GO: A web application for querying gene sets for specific GO terms.
Bioinformation
Vitenskapelig artikkel
-
Tripathi, Sushil;
Vercruysse, Steven;
Chawla, Konika;
Christie, Karen R.;
Blake, Judith A;
Huntley, Rachael P.;
Orchard, Sandra;
Hermjakob, Henning;
Thommesen, Liv;
Lægreid, Astrid.
(2016)
Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.
Database: The Journal of Biological Databases and Curation
Vitenskapelig artikkel
2015
-
Tripathi, Sushil;
Flobak, Åsmund;
Chawla, Konika;
Baudot, Anaïs;
Bruland, Torunn;
Thommesen, Liv;
Kuiper, Martin Tremen R.;
Lægreid, Astrid.
(2015)
The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.
BMC Systems Biology
Vitenskapelig artikkel
2013
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Chawla, Konika;
Tripathi, Sushil;
Thommesen, Liv;
Lægreid, Astrid;
Kuiper, Martin.
(2013)
TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors.
Bioinformatics
Vitenskapelig artikkel
2011
-
Chawla, Konika;
Barah, Pankaj;
Kuiper, Martin;
Bones, Atle M..
(2011)
Systems Biology: a Promising Tool to Study Abiotic Stress Responses.
Vitenskapelig kapittel
Tidsskriftspublikasjoner
-
Toraskar, Jimita Prashant;
Magnussen, Synnøve;
Chawla, Konika;
Svineng, Gunbjørg;
Steigedal, Tonje S..
(2018)
Nephronectin mediates p38 MAPK‐induced cell viability via its integrin binding enhancer motif.
FEBS Open Bio
Vitenskapelig artikkel
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål;
Løset, Mari.
(2019)
Combined mRNA and miRNA Analysis of Psoriatic Skin.
Forum for Nordic Dermato-Venereology
Konferanseabstract
-
Chawla, Konika;
Kuiper, Martin.
(2016)
Genes2GO: A web application for querying gene sets for specific GO terms.
Bioinformation
Vitenskapelig artikkel
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Hegre, Siv Anita;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål.
(2021)
MicroRNA profiling of psoriatic skin identifies 11 miRNAs associated with disease severity.
Experimental Dermatology
Vitenskapelig artikkel
-
Chawla, Konika;
Tripathi, Sushil;
Thommesen, Liv;
Lægreid, Astrid;
Kuiper, Martin.
(2013)
TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors.
Bioinformatics
Vitenskapelig artikkel
-
Tripathi, Sushil;
Flobak, Åsmund;
Chawla, Konika;
Baudot, Anaïs;
Bruland, Torunn;
Thommesen, Liv;
Kuiper, Martin Tremen R.;
Lægreid, Astrid.
(2015)
The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.
BMC Systems Biology
Vitenskapelig artikkel
-
Tingö, Lina;
Ahlberg, Emelie;
Johansson, Lovisa;
Pedersen, Sindre Andre;
Chawla, Konika;
Sætrom, Pål;
Cione, Erika;
Simpson, Melanie Rae.
(2021)
Non-coding RNAs in human breast milk: A systematic review.
Frontiers in Immunology
Vitenskapelig oversiktsartikkel
-
Mjelle, Robin;
Dima, Simona O;
Bacalbasa, Nicolae;
Chawla, Konika;
Sorop, Andrei;
Cucu, Dana;
Herlea, Vlad;
Sætrom, Pål;
Popescu, Irinel.
(2019)
Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients.
BMC Cancer
Vitenskapelig artikkel
-
Tripathi, Sushil;
Vercruysse, Steven;
Chawla, Konika;
Christie, Karen R.;
Blake, Judith A;
Huntley, Rachael P.;
Orchard, Sandra;
Hermjakob, Henning;
Thommesen, Liv;
Lægreid, Astrid.
(2016)
Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.
Database: The Journal of Biological Databases and Curation
Vitenskapelig artikkel
-
Hegre, Siv Anita;
Samdal, Helle;
Klima, Antonin;
Stovner, Endre Bakken;
Nørsett, Kristin Gabestad;
Liabakk, Nina-Beate;
Olsen, Lene Christin;
Chawla, Konika;
Aas, Per Arne;
Sætrom, Pål.
(2021)
Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation.
Scientific Reports
Vitenskapelig artikkel
Del av bok/rapport
-
Chawla, Konika;
Barah, Pankaj;
Kuiper, Martin;
Bones, Atle M..
(2011)
Systems Biology: a Promising Tool to Study Abiotic Stress Responses.
Vitenskapelig kapittel
Studentoppgave eller avhandling
-
Chawla, Konika;
Kuiper, Martin.
(2017)
Discovering, analysing and taking care of knowledge.
Norges teknisk-naturvitenskapelige universitet
Doktoravhandling
Formidling
2017
-
KonferanseposterWohlwend, Martin Rainer; Chawla, Konika; Wisløff, Ulrik; Bianco Nascimento Moreira, Jose. (2017) Exercise regulates expression of long noncoding RNAs. 15th Annual CHFR Symposium on Heart Failure
2016
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KonferanseposterJohansen, Jostein; Chawla, Konika; Olsen, Lene Christin; Sætrom, Pål. (2016) Bioinformatics Core Facility. Seminar for staff at the future Faculty of Medicine and Health Sciences
2014
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KonferanseposterSanabria, Adriana Maria; Chawla, Konika; Drabløs, Finn; Steigedal, Magnus; Mæland, Johan A.; Afset, Jan Egil. (2014) An attempt to elucidate the genes encoding R3,Z1 and Z2 surface exposed proteins from two streptococcus agalactiae strains from Zimbabwe. 2014 XIX Lancefield International Symposium on Streptococci and Streptococcal Diseases
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ForedragMulder, Wim De; Zavareh, Zahra; Chawla, Konika; Kuiper, Martin. (2014) Experimental Verification of the Quality of Clusterings Produced by Hard Clustering Algorithms After the Removal of Unstable Data Elements. BIOTECHNO 2014, DBKDA 2014
2011
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KonferanseposterTripathi, Sushil; Venkatesan, Aravind; Egaña, Mikel; Zavareh, Zahra; Chawla, Konika; Mironov, Vladimir; Thommesen, Liv; Bruland, Torunn; Kuiper, Martin; Lægreid, Astrid. (2011) Automated Assessment of High Throughput Hypotheses on Gene Regulatory Mechanisms Involved in the Gastrin Response. Bio-Ontologies 2011